Information for 3-TSACTCTCAMMWT (Motif 5)

A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T
Reverse Opposite:
C T G A C G T A C A G T C A G T C G A T C T A G T C G A T C A G C G T A A C T G C G A T A T C G T C G A
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.682
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif33.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets58.3 +/- 22.9bp
Average Position of motif in Background50.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TSACTCTCAMMWT--
TCACTTTCACTTTCN
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TSACTCTCAMMWT-
--ACTTTCACTTTC
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TSACTCTCAMMWT-----
---CTTTCANTATGACTV
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TSACTCTCAMMWT-
--ACTTTCACTTTC
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TSACTCTCAMMWT
CTGTCTGTCACCT-
 A C G T A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TSACTCTCAMMWT------
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TSACTCTCAMMWT
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TSACTCTCAMMWT------
-NAGTTTCABTHTGACTNW
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TSACTCTCAMMWT
TGTCTGDCACCT-
 A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TSACTCTCAMMWT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A G C T T A G C C G T A T G A C A C G T A G T C A G C T A G T C G C T A G T C A G T C A G C A T A G C T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C