Information for 1-TTGGTTTAAC (Motif 4)

A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C
Reverse Opposite:
C T A G A G C T A C G T C G T A T C G A C G T A A G T C A G T C G T C A G T C A
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.834
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.01%
Number of Background Sequences with motif97.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.9 +/- 26.9bp
Average Position of motif in Background54.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTTTAAC----
GACNGTTTAACGGTT
 A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGGTTTAAC-
-TGGTTTCAGT
 A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTTAAC----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTTAAC----
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGGTTTAAC
--GGATTAGC
 A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTTTAAC--
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGGTTTAAC
-GGGATTAA-
 A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGGTTTAAC
-GGGATTANN
 A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

FOXP1/MA0481.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGGTTTAAC----
CTTTGTTTACTTTTN
 A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTTAAC
NNTGTGGTTT---
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T A G C T C G A T G T C A T C G A G A T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T