Information for 4-CACGCTCCCTGAGGCT (Motif 18)

A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
Reverse Opposite:
C T G A A T C G T G A C A T G C A C G T A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A C T G A C G T A T C G
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 28.7bp
Average Position of motif in Background59.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACGCTCCCTGAGGCT
GTCACGCTCNCTGA----
 A C G T A C G T A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CACGCTCCCTGAGGCT
-----TGCCTGAGGCN
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CACGCTCCCTGAGGCT
---WTGSCCTSAGGS-
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CACGCTCCCTGAGGCT
---ATGCCCTGAGGC-
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CACGCTCCCTGAGGCT
---GCTCCG-------
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CACGCTCCCTGAGGCT
-----NGCCTNAGGCN
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACGCTCCCTGAGGCT
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACGCTCCCTGAGGCT
GGCCACGCCCCCTT-----
 A C G T A C G T A C G T A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CACGCTCCCTGAGGCT
-----NGCCTGAGGCN
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CACGCTCCCTGAGGCT--
---ATTGCCTGAGGCAAT
 A T G C C G T A A G T C A C T G A G T C A C G T A G T C A G T C A G T C C G A T A C T G G T C A A T C G A C T G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T