Information for 7-GCGGGTGAGA (Motif 17)

T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
Reverse Opposite:
A G C T G A T C C G A T A T G C T C G A T A G C A G T C G T A C A T C G A G T C
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.700
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.28%
Number of Background Sequences with motif1194.0
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets51.2 +/- 23.6bp
Average Position of motif in Background50.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCGGGTGAGA
TATGCGGGTA---
 A C G T A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCGGGTGAGA
GGGCGGGAAGG-
 A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCGGGTGAGA
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------GCGGGTGAGA
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGTGAGA-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGGGTGAGA
GGGCGGGAAGG-
 A C G T A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCGGGTGAGA
-CAGGTGAGG
 T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGGGTGAGA
GGCGGGAARN-
 A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGGGTGAGA
TGCGTGGGYG-
 A C G T T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCGGGTGAGA
--AGGTGTGA
 T C A G T A G C C A T G C T A G A T C G A G C T T A C G G C T A C T A G T C G A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A