Information for 2-GVTGTGGTTT (Motif 2)

C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
Reverse Opposite:
C G T A C G T A T C G A G T A C A G T C G T C A G A T C G C T A A C G T G T A C
p-value:1e-24
log p-value:-5.720e+01
Information Content per bp:1.628
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif18.14%
Number of Background Sequences with motif3503.3
Percentage of Background Sequences with motif7.31%
Average Position of motif in Targets50.6 +/- 25.2bp
Average Position of motif in Background50.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GVTGTGGTTT
NNTGTGGTTT
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GVTGTGGTTT-
NNHTGTGGTTWN
 A C G T C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GVTGTGGTTT
GTCTGTGGTTT
 A C G T C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GVTGTGGTTT
GCTGTGGTTT
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:GVTGTGGTTT-
-CTGTGGTTTN
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:GVTGTGGTTT
---GTGGAT-
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GVTGTGGTTT
TTTGCGGTTT
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GVTGTGGTTT
-TTGCGGTTT
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GVTGTGGTTT
ACAGGATGTGGT--
 A C G T A C G T A C G T A C G T C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GVTGTGGTTT---
--TGTGGATTNNN
 C A T G T G C A C G A T C T A G A C G T A C T G A C T G A G C T G C A T G C A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A