Information for 5-GGCGGGCCTT (Motif 7)

A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
Reverse Opposite:
G T C A G T C A A T C G T A C G A T G C A T G C A G T C A C T G A T G C A G T C
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.827
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.9 +/- 23.6bp
Average Position of motif in Background50.8 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.73
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGGCCTT
GGGNGGGGGCGGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGCCTT-
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGCCTT
AGGGGGCGGGGCTG
 A C G T A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGCCTT
GGGGGCGGGGCC-
 A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGGCCTT---
NTCGCGCGCCTTNNN
 A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGGCCTT---
ANCGCGCGCCCTTNN
 A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGGCCTT
GGGGGCGGGGC--
 A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCGGGCCTT
-CNAGGCCT-
 A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGCGGGCCTT-
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGGCCTT-
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G T G A C C T A G A T C G A T C G A T G C A T G C A C G T C A G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A