Information for 2-RGGGGCTGCGGCCCRV (Motif 8)

T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
Reverse Opposite:
A G C T A G C T A T C G A T C G A T C G G A T C A T G C A C T G T G A C G T C A A T C G T A G C A G T C A T G C A G T C A G T C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.686
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif375.3
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets53.2 +/- 22.9bp
Average Position of motif in Background48.6 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGGGGCTGCGGCCCRV
AGATGCTRCTRCCHT-
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGGGGCTGCGGCCCRV
CGCAGCTGCG------
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:RGGGGCTGCGGCCCRV
-GGGGCCGAGGCCTG-
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RGGGGCTGCGGCCCRV
----GGTCCCGCCC--
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGGGGCTGCGGCCCRV
AAGGKGRCGCAGGCA--
 A C G T T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:RGGGGCTGCGGCCCRV
----GCTTCC------
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:RGGGGCTGCGGCCCRV
----GCTCCG------
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:RGGGGCTGCGGCCCRV
---NGCTN--------
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RGGGGCTGCGGCCCRV
NRRGGGTCTT--------
 A C G T A C G T T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RGGGGCTGCGGCCCRV
-GGGGGTGTGTCC---
 T C A G A C T G T A C G T C A G A C T G A T G C C A G T A C T G A G T C A T C G C A T G A T G C A T G C T A G C T C G A T C G A
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T