Information for 4-CTCTTCTTTTGTG (Motif 6)

A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C T G A C G T A C G T A C G T A A C T G C T G A C G T A A T C G C G T A A C T G
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 17.9bp
Average Position of motif in Background44.0 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG--
-TTTTTTTTCNNGTN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCTTCTTTTGTG--
-----CCTTTGTTTT
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTCTTCTTTTGTG
-----CCWTTGTY
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG-----
--ANTCCTTTGTCTNNNN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG-----
--NNNNTTGTGTGCTTNN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG--
NTNTTGTTGTTTGTN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG----
--NNNCCATTGTGTNAN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG-----
-TNNTCCTTTGTTCTNNT
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTTCTTTTGTG-----
-NNNTCCTTTGTTCTNNN
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTCTTCTTTTGTG
-----CCTTTGTT
 A G T C A C G T A T G C C G A T A G C T A G T C A C G T A C G T A C G T A G C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T