Information for 13-AGGGAGCGAGCGA (Motif 17)

G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
Reverse Opposite:
G C A T G T A C A T C G A G T C A G C T A G T C A T C G A T G C A C G T G A T C A T G C A T G C A C G T
p-value:1e-8
log p-value:-1.861e+01
Information Content per bp:1.759
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif145.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets44.0 +/- 27.4bp
Average Position of motif in Background51.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGGAGCGAGCGA
-CGGAGC------
 G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAGCGA
-GGGCGGGACC--
 G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AGGGAGCGAGCGA-----
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAGCGA
-GGGCGGGAAGG-
 G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGGGAGCGAGCGA
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

E2F4/MA0470.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAGCGA
-GGGCGGGAAGG-
 G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGAGCGAGCGA
NNNTTAGGTAGCNTNT--
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGGGAGCGAGCGA
-GAGSCCGAGC--
 G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGAGCGAGCGA
NNTGTAGGTAGCANNT--
 A C G T A C G T A C G T A C G T A C G T G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AGGGAGCGAGCGA
ACAGGAAGTG-----
 A C G T A C G T G T C A A T C G T A C G C T A G G T C A A T C G T A G C A C T G C T G A T A C G T A G C A C T G C G T A
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T