Information for 1-GAGGTGGTTT (Motif 1)

C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
Reverse Opposite:
G T C A C G T A G T C A T G A C G T A C T C G A T A G C G T A C A C G T G A T C
p-value:1e-15
log p-value:-3.608e+01
Information Content per bp:1.633
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif12.22%
Number of Background Sequences with motif2495.7
Percentage of Background Sequences with motif5.26%
Average Position of motif in Targets50.9 +/- 25.3bp
Average Position of motif in Background49.6 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GAGGTGGTTT
NNTGTGGTTT
 C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAGGTGGTTT
GCTGTGGTTT
 C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GAGGTGGTTT
ACAGGATGTGGT--
 A C G T A C G T A C G T A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GAGGTGGTTT-
-CTGTGGTTTN
 C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAGGTGGTTT
GTCTGTGGTTT
 A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGGTTT-
NNHTGTGGTTWN
 A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGGTTT-
NTCGGTGGTCGC
 A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T A C G T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAGGTGGTTT
---GTGGAT-
 C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGGTTT
TGCTGTGATTT
 A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGGTTT----
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T C T A G T G C A C A T G A T C G A G C T C A T G A C T G C A G T G C A T C A G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G