Information for 23-KCAWCTGGKGYCA (Motif 30)

A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
Reverse Opposite:
A C G T A C T G T C G A A G T C G T C A A G T C A G T C C G T A A C T G C G A T A C G T A C T G T G C A
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.874
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 18.8bp
Average Position of motif in Background32.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--KCAWCTGGKGYCA
GGTCANYTGAGGWCA
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KCAWCTGGKGYCA
NVCAGCTGBBNN--
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KCAWCTGGKGYCA
ATGCAACAGGTGG--
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--KCAWCTGGKGYCA
GAGCAACAGGTGGTT
 A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KCAWCTGGKGYCA
AACATCTGGA----
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-KCAWCTGGKGYCA
GCCAGCTGBTNB--
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:KCAWCTGGKGYCA-----
-TNNNNGGTGTCATNTNT
 A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:KCAWCTGGKGYCA
NCAGCTGCTG---
 A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-KCAWCTGGKGYCA
CGCACCTGCT----
 A C G T A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:KCAWCTGGKGYCA-----
-NTNNNGGGGTCANGNNN
 A C G T A G T C C G T A C G T A A G T C A C G T A C T G A C T G A C G T A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A