Information for 16-CTTTGCCATGTCTGAG (Motif 19)

T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
Reverse Opposite:
G T A C G A C T A T G C C G T A A T C G G T C A G T A C C G T A C G A T C T A G T C A G G A T C C G T A G T C A C T G A A C T G
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.662
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif35.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets60.3 +/- 22.6bp
Average Position of motif in Background49.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTTGCCATGTCTGAG
NNTTGGCANN------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTTGCCATGTCTGAG
--TTGCCAAG------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTTGCCATGTCTGAG
---TGTCANYT-----
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTTGCCATGTCTGAG
ATTTTCCATT------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGCCATGTCTGAG
ANTCCTTTGTCTNNNN----
 A C G T A C G T A C G T A C G T T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTGCCATGTCTGAG
-NTTGGCANN------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTTGCCATGTCTGAG
CCWTTGTY---------
 A C G T T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTTTGCCATGTCTGAG
CTTTGT----------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTTGCCATGTCTGAG
--YTGWCADY------
 T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTTGCCATGTCTGAG
CCWTTGTYYB-------
 A C G T T G A C G A C T A C G T A C G T C T A G A G T C A G T C G C T A G C A T C A T G C A G T A T G C G C A T A T C G C T G A C A T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T