Information for 10-AYGGCTTWTA (Motif 18)

C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A
Reverse Opposite:
A C G T G T C A C G T A C T G A C G T A A C T G A G T C A G T C C T G A A C G T
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.886
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets29.6 +/- 21.7bp
Average Position of motif in Background53.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AYGGCTTWTA-----
---CCTTTTATAGNC
 C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AYGGCTTWTA
-NGGATTAN-
 C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AYGGCTTWTA
--NGCTN---
 C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AYGGCTTWTA
NGGGATTA--
 C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AYGGCTTWTA
TTGACTTTT-
 C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AYGGCTTWTA---
NNNNNNCTTTTATAN
 A C G T A C G T C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AYGGCTTWTA---
NNNNNNCTTTTATAN
 A C G T A C G T C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0045.1_Myb_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AYGGCTTWTA-
NNNNTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AYGGCTTWTA--
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AYGGCTTWTA-
NNANTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A C T G A C T G A G T C A C G T A G C T C G A T A C G T C G T A A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A