Information for 9-CGCACGAGAG (Motif 8)

A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
Reverse Opposite:
A T G C A C G T A G T C G C A T A T G C C T A G A G C T A T C G A G T C A T C G
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.839
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif58.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets55.2 +/- 25.1bp
Average Position of motif in Background51.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Id2/MA0617.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCACGAGAG
-GCACGTGA-
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGCACGAGAG-
-NCACGTGACN
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G A C G T
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGCACGAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCACGAGAG
GGCACGCGTC
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Tcfl5/MA0632.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCACGAGAG
GGCACGTGCC
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCACGAGAG-
-KCACGTGMCN
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G A C G T
A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCACGAGAG----
NNNACCGAGAGTNNN
 A C G T A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCACGAGAG
ATCACGTGAC
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

TFE3/MA0831.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCACGAGAG
ATCACGTGAC
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCACGAGAG
-GCACGTGT-
 A T G C C T A G A T G C C T G A A G T C A T C G C G T A A C T G T G C A A T C G
A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T