Information for 5-KATCACCACAACC (Motif 6)

A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
Reverse Opposite:
A C T G A T C G C G A T A C G T A C T G A C G T C A T G C T A G C G A T A C T G C G T A G C A T G T C A
p-value:1e-13
log p-value:-3.110e+01
Information Content per bp:1.734
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.2 +/- 21.9bp
Average Position of motif in Background49.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-KATCACCACAACC-
ATGTCACAACAACAC
 A C G T A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:KATCACCACAACC
--AAACCACAGC-
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:KATCACCACAACC
-NWAACCACADNN
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:KATCACCACAACC---
-CAAACAACAACACCT
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:KATCACCACAACC-----
-AACACCAAAACAAAGGA
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KATCACCACAACC
-ATCACCCCAC--
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:KATCACCACAACC
-NAAACCACAG--
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:KATCACCACAACC
-ATCACCCCAT--
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:KATCACCACAACC
--AAACCACANN-
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KATCACCACAACC
--AAACCACAGAN
 A C G T C G T A A C G T G T A C G C T A A G T C G T A C G T C A T G A C C G T A C G T A A T G C G T A C
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C