Information for 7-GAASTVTCTGCACTAA (Motif 9)

T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
Reverse Opposite:
A C G T C G A T C G T A A T C G A C G T A C T G A G T C C G T A A T C G C G T A A G T C C G T A A T G C C G A T A G C T A G T C
p-value:1e-13
log p-value:-3.152e+01
Information Content per bp:1.739
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 22.9bp
Average Position of motif in Background49.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAASTVTCTGCACTAA--
-NNGTATGTGCACATNNN
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A A C G T A C G T
A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAASTVTCTGCACTAA--
-NTNTATGTGCACATNNN
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A A C G T A C G T
A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Vdr/MA0693.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAASTVTCTGCACTAA
TGAACTCNATGAACTC-
 A C G T T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAASTVTCTGCACTAA
---CTGTCTGG-----
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAASTVTCTGCACTAA
-VBSYGTCTGG-----
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAASTVTCTGCACTAA
NNTNNTGTCTGGNNTNG
 A C G T T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAASTVTCTGCACTAA
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAASTVTCTGCACTAA---
-----TTATGTACTAATAA
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GAASTVTCTGCACTAA---
--NSTGTTTRCWCAGBNNN
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A A C G T A C G T A C G T
A C G T A C G T G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAASTVTCTGCACTAA
---TWGTCTGV-----
 T A C G C T G A C G T A A T C G A C G T T A C G A C G T A T G C A C G T A C T G T G A C G T C A A T G C G C A T G C T A C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T