Information for 3-RGCAGSHGGCAGATGG (Motif 6)

C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G
Reverse Opposite:
G T A C A G T C T G C A G C A T A T G C C G A T A C T G A G T C A G T C C A T G A T G C A G T C A G C T A C T G A G T C G A C T
p-value:1e-17
log p-value:-3.935e+01
Information Content per bp:1.565
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif8.48%
Number of Background Sequences with motif1064.2
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets49.7 +/- 23.7bp
Average Position of motif in Background50.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.74
Offset:7
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG-
-------AACAGATGGC
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.72
Offset:7
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG-
-------AACAGATGGT
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:3
Score:0.68
Offset:5
Orientation:forward strand
Alignment:RGCAGSHGGCAGATGG-
-----VNAVCAGCTGGC
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:RGCAGSHGGCAGATGG-----
----AAGGCCAGATGGTCCGG
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG-
-------AACAKATGGY
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.67
Offset:5
Orientation:forward strand
Alignment:RGCAGSHGGCAGATGG-
-----NNVVCAGCTGBN
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:7
Score:0.64
Offset:8
Orientation:forward strand
Alignment:RGCAGSHGGCAGATGG--
--------VCAGCTGBNN
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG-
----NGNGACAGCTGCN
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG---
----CACGGCAGTTGGTNN
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:RGCAGSHGGCAGATGG--
--------GCAGCTGTNN
 C T G A T C A G G T A C T C G A T A C G T A C G G T A C T C A G T C A G G T A C C G T A T A C G C G T A A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T