Information for 16-RGAGAGAGAG (Motif 35)

T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G C T
p-value:1e-2
log p-value:-5.144e+00
Information Content per bp:1.907
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif270.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets41.9 +/- 30.6bp
Average Position of motif in Background48.3 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-RGAGAGAGAG-
GAAAGTGAAAGT
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RGAGAGAGAG---
AGAAAGTGAAAGTGA
 A C G T A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RGAGAGAGAG----
TTGACCGAGAATTCC
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RGAGAGAGAG----
NNNACCGAGAGTNNN
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RGAGAGAGAG-
GRAASTGAAAST
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RGAGAGAGAG-
GAAAGTGAAAGT
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGAGAGAGAG-
GGAAGTGAAAST
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGAGAGAGAG-
GAAASYGAAASY
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RGAGAGAGAG----
GNNACCGAGAATNNN
 A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--RGAGAGAGAG
CGGAAGTGAAAC
 A C G T A C G T T C G A C T A G C G T A A C T G C G T A A C T G G T C A A C T G C G T A A C T G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C