Information for 25-TTTGCATGTAGTCATG (Motif 34)

A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G C G T A G T A C A C G T C G T A A G T C C G T A A C G T A C T G A T G C C G T A C G T A C G T A
p-value:1e-4
log p-value:-9.221e+00
Information Content per bp:1.915
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 16.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTTGCATGTAGTCATG
TTCATTTGCATAT-------
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCATGTAGTCATG
ATTTGCATAT-------
 A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTGCATGTAGTCATG
ATTTGCATAA-------
 A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTTGCATGTAGTCATG
BTVATTWGCATA--------
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCATGTAGTCATG
NNTTTTACATGTANNNT--
 A C G T A C G T A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T A C G T A C G T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTTGCATGTAGTCATG
---NRRTGACGTCAT-
 A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTTGCATGTAGTCATG-
-----ATGACGTCATCN
 A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTTGCATGTAGTCATG
---NGATGACGTCAT-
 A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T C T A G T C A G T C G A C G A T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G C T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCATGTAGTCATG
ANTATTACATGTANNNN--
 A C G T A C G T A C G T A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T A C G T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTTGCATGTAGTCATG
----GATGACGTCATC
 A C G T C G A T C G A T A T C G A G T C C G T A A C G T A C T G C G A T G T C A A C T G C G A T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C