Information for 15-CADACTCTTCAAATCA (Motif 20)

A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G G T C A A C G T A G C T A C G T A C T G C G T A C G T A A C T G C T G A T C A G A C G T G T C A A C G T A T C G
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.804
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 24.4bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CADACTCTTCAAATCA
-----NATTCAAAT--
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CADACTCTTCAAATCA-
---AATATGCAAATTAG
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PB0082.1_Tcf3_1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CADACTCTTCAAATCA---
--TATAGATCAAAGGAAAA
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CADACTCTTCAAATCA--
--TTGTATGCAAATTAGA
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CADACTCTTCAAATCA--
--TTGTATGCAAATTAGA
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CADACTCTTCAAATCA--
--TTGTATGCAAATTAGA
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CADACTCTTCAAATCA---
--TATAGATCAAAGGAAAA
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CADACTCTTCAAATCA-
-----WATGCAAATGAG
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CADACTCTTCAAATCA
---AATATGCAAATT-
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A
A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CADACTCTTCAAATCA
-----ACATCAAAGG-
 A T G C G T C A C A G T C G T A A G T C A G C T G T A C A C G T A C G T A G T C G T C A C T G A C G T A A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T