Information for 3-CACACAGRGCCWCTCY (Motif 6)

A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
Reverse Opposite:
C T A G A T C G C T G A A C T G G C T A A C T G C T A G A G T C A G T C G T A C A C G T A C T G A G C T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.888
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.2 +/- 26.2bp
Average Position of motif in Background43.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY
--CACAGN--------
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGRGCCWCTCY
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CACACAGRGCCWCTCY--
-------AGCCACTCAAG
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY
-ACAAAGGNBCCT---
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CACACAGRGCCWCTCY-
-------AASCACTCAA
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY
-ACAAAG---------
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY
CACGCA----------
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACACAGRGCCWCTCY
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY---
-------GGCCACRCCCMK
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CACACAGRGCCWCTCY---
---NNAGTCCCACTCNNNN
 A G T C C G T A A G T C C T G A A G T C C G T A A C T G T C A G A C T G A G T C A G T C C G A T A G T C A G C T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A