Information for 10-TACCHWTGGT (Motif 18)

G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
Reverse Opposite:
C T G A A T G C T G A C C G T A C G A T C G A T C T A G T A C G G C A T C G T A
p-value:1e-7
log p-value:-1.613e+01
Information Content per bp:1.648
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif238.1
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets58.1 +/- 27.3bp
Average Position of motif in Background50.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACCHWTGGT
NACATATGGN
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TACCHWTGGT
--CCTTTGTT
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TACCHWTGGT
GAACAATGG-
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TACCHWTGGT
--CCWTTGTY
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TACCHWTGGT
-ACATATGG-
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TACCHWTGGT
VRAACAATGG-
 A C G T G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TACCHWTGGT----
--TGATTGGCTANN
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TACCHWTGGT---
TCACCTCTGGGCAG
 A C G T G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T A C G T A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

OLIG1/MA0826.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TACCHWTGGT
AACATATGTT
 G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TACCHWTGGT-
AAACATATGTTT
 A C G T G C A T C G T A A T G C G A T C G C T A G C T A G C A T A C T G T A C G A G C T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T