Information for 5-KTGGGTAATC (Motif 7)

A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C
Reverse Opposite:
A T C G C T G A A G C T C A G T C G T A G T A C G T A C G A T C C G T A T G A C
p-value:1e-15
log p-value:-3.548e+01
Information Content per bp:1.727
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif38.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets50.1 +/- 28.8bp
Average Position of motif in Background38.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:KTGGGTAATC--
----TTAATCCG
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:KTGGGTAATC--
----YTAATCCY
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:KTGGGTAATC--
----TTAATCCT
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:KTGGGTAATC--
----TTAATCCC
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:KTGGGTAATC-
---GCTAATCC
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T
A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:forward strand
Alignment:KTGGGTAATC---
---NYTAATCCYB
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:forward strand
Alignment:KTGGGTAATC---
---GCTAATCCCC
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:KTGGGTAATC--
---CTTAATCCC
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:KTGGGTAATC---
---CCTAATCCGC
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:KTGGGTAATC-------
NTTGTTAATCCCTCTNN
 A C T G C G A T C T A G A C T G A C T G C G A T G T C A C T G A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A