Information for 2-ACATWCCTTTGGCCTT (Motif 6)

G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
Reverse Opposite:
G T C A C G T A C T A G C A T G T G A C A T G C C G T A T G C A C G T A C A T G A C T G G C T A C G T A C G A T A T C G C A G T
p-value:1e-15
log p-value:-3.558e+01
Information Content per bp:1.678
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 23.7bp
Average Position of motif in Background48.5 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ACATWCCTTTGGCCTT
-----CCTTTGTTTT-
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACATWCCTTTGGCCTT--
--ANTCCTTTGTCTNNNN
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACATWCCTTTGGCCTT-
--AACCCTTTGATCTTT
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T A C G T
A C G T A C G T C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACATWCCTTTGGCCTT-
--TGGACTTTGNNCTCN
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACATWCCTTTGGCCTT
-----CCWTTGTY---
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACATWCCTTTGGCCTT
-----YCTTTGTTCC-
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACATWCCTTTGGCCTT
-----CCTTTGTT---
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACATWCCTTTGGCCTT-
-----CCTTTGATCTTT
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.64
Offset:5
Orientation:forward strand
Alignment:ACATWCCTTTGGCCTT
-----CCATTGTTTT-
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACATWCCTTTGGCCTT
--TGACCTTTGCCCTA
 G T C A A T G C C G T A C G A T C G A T T A G C G A T C G C A T A C G T A C G T A T C G A C T G G T A C G A T C G C A T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A