Information for 19-GTGCAGTGTGTTA (Motif 29)

A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A
Reverse Opposite:
A C G T G T C A G T C A G T A C C G T A A G T C G T C A G T A C G C A T A C T G G A T C C G T A T A G C
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.647
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif130.6
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets52.2 +/- 28.6bp
Average Position of motif in Background48.1 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GTGCAGTGTGTTA
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

GLI2/MA0734.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GTGCAGTGTGTTA--
---CAGTGTGGTCGC
 A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T A C G T
A C G T A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTGCAGTGTGTTA-
GTGCCGTGTGCAAA
 A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGCAGTGTGTTA-
NNNCCATTGTGTNAN
 A C G T A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGCAGTGTGTTA--
GAACADWATGTTCTT
 A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GTGCAGTGTGTTA
AACAATGTGCAGTGTT---
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T A C G T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGCAGTGTGTTA--
GGGAACATTGTGTTCCC
 A C G T A C G T A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTGCAGTGTGTTA-
----AAGGTGTKAA
 A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGCAGTGTGTTA--
AGNACAGNCTGTTCTN
 A C G T A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTGCAGTGTGTTA
---CTTTGT----
 A T C G G A C T C T A G G T A C C G T A A C T G C A G T C T A G G C A T A C T G C A G T C A G T T G C A
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T