Information for 6-AGYRTSYTACASMRTG (Motif 28)

C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C A T G A T G C G A C T T C A G A C G T C G T A C T G A A T G C C G T A A G C T C T A G A G T C A C G T
p-value:1e-6
log p-value:-1.606e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 17.7bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGYRTSYTACASMRTG
--NTTGATACATT---
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGYRTSYTACASMRTG--
---YDGHTACAWTGTADC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGYRTSYTACASMRTG--
---TWGHWACAWTGTWDC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.49
Offset:5
Orientation:forward strand
Alignment:AGYRTSYTACASMRTG----
-----CTCACACAATGGCGC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

NR3C1/MA0113.3/Jaspar

Match Rank:5
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGYRTSYTACASMRTG-----
----GGGTACATAATGTTCCC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGYRTSYTACASMRTG-----
----GGGAACACAATGTTCCC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGYRTSYTACASMRTG--
-TCNNTTTACAGCGNNNT
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGYRTSYTACASMRTG--
-TCNNTTTACAGCGNNNT
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:AGYRTSYTACASMRTG--
-TCNCTTTACAGCGNNNT
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGYRTSYTACASMRTG-----
----NGGTACACNGTGTTCCC
 C G T A A C T G G A T C C T G A A C G T A T C G A G C T A C G T C G T A A G T C C G T A A T C G G T A C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C