Information for 6-GCAATCTGGC (Motif 6)

A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C
Reverse Opposite:
T C A G G T A C G T A C C G T A T C A G C T G A A C G T G A C T T A C G T G A C
p-value:1e-14
log p-value:-3.255e+01
Information Content per bp:1.606
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.18%
Number of Background Sequences with motif1282.8
Percentage of Background Sequences with motif2.72%
Average Position of motif in Targets49.5 +/- 24.6bp
Average Position of motif in Background49.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCAATCTGGC--
--GGTCTGGCAT
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCAATCTGGC
GCNGCCATCTTG-
 A C G T A C G T A C G T A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCAATCTGGC-
-----TTGGCA
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCAATCTGGC---
----NTTGGCANN
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCTGGC---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCAATCTGGC
GCCGCCATCTTG-
 A C G T A C G T A C G T A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAATCTGGC
GCCATCTGTT
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCAATCTGGC-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAATCTGGC
RCCATMTGTT
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCAATCTGGC---
---NNTTGGCANN
 A C T G A T G C C T G A T G C A G A C T A G T C C G A T C A T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C