Information for 13-CAATTACTGT (Motif 20)

A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C T G
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 8.7bp
Average Position of motif in Background57.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX1/MA0666.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAG---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAA---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAC---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAA---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAC---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T

DLX6/MA0882.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
CCAATTAC---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A G C G A T C G T C A G T C A C G A T A G C T G C T A G T A C A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CAATTACTGT
-AATTAGTG-
 A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CAATTACTGT
GCAATTAA---
 A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T A C G T A C G T

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------CAATTACTGT
ATNNACTAATTACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CAATTACTGT
ACCAATTA----
 A C G T A C G T A G T C C G T A C G T A A C G T A C G T C G T A A G T C A C G T A C T G A C G T
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T A C G T A C G T