Information for 8-AAGCTGATTA (Motif 13)

C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A G A C T A T G C C G T A A T C G A T G C A C G T A C G T
p-value:1e-10
log p-value:-2.361e+01
Information Content per bp:1.841
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif118.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets49.2 +/- 30.4bp
Average Position of motif in Background48.4 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AAGCTGATTA-
-AGCTCATTAT
 C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTGATTA
GTAATCDGATTA
 A C G T A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTGATTA-----
NNNACCTCATTATCNTN
 A C G T A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAGCTGATTA-----
GCAACCTCATTATNNNN
 A C G T A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0126.1_Obox6/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAGCTGATTA---
AAAAACGGATTATTG
 A C G T A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGCTGATTA-
AAGAGGATTAG
 C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAGCTGATTA-
TAATYNRATTAR
 A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

EVX1/MA0887.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAGCTGATTA--
--GGTAATTAGC
 C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T A C G T
A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

EVX2/MA0888.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAGCTGATTA--
--GGTAATTAGC
 C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAGCTGATTA
NTAATBNAATTA
 A C G T A C G T C G T A C G T A T A C G T A G C A C G T A T C G C G T A C G A T A C G T C G T A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A