Information for 1-GAGTGGTTCHGDGGGA (Motif 3)

A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A G T C G C A T A T G C C G T A C T A G C G T A C T G A A G T C A G T C C G T A A G T C G C A T A G T C
p-value:1e-11
log p-value:-2.762e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 29.6bp
Average Position of motif in Background69.4 +/- 11.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGTTCHGDGGGA
CTTGAGTGGCT--------
 A C G T A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGGTTCHGDGGGA
NNTGTGGTTT-------
 A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGTTCHGDGGGA
TTGAGTGSTT--------
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGTTCHGDGGGA
TTRAGTGSYK--------
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGTGGTTCHGDGGGA
------TTCTNMGGAA
 A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GAGTGGTTCHGDGGGA---
----ANTTCTCAGGAANNN
 A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGTGGTTCHGDGGGA
TGCGGAGTGGGACTGG----
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGTTCHGDGGGA
GTCTGTGGTTT-------
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGTTCHGDGGGA
NNHTGTGGTTWN------
 A C G T A C G T A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GAGTGGTTCHGDGGGA
--GTGGAT--------
 A C T G C G T A A C T G C G A T A C T G A C T G A G C T A C G T A G T C G A C T A T C G C G T A A C T G A C T G A T C G C G T A
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T