p-value: | 1e-10 |
log p-value: | -2.530e+01 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 53.4 +/- 16.3bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AGTGATGGCTGGA NNNNNATTGATGNGTGN- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA -ATGATKGATGRC |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA---- NNTNNTGTCTGGNNTNG |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA --TGATTGATGA- |
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PB0167.1_Sox13_2/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGTGATGGCTGGA----- -GTATTGGGTGGGTAATT |
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PBX1/MA0070.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA TTTGATTGATGN- |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA GTTAATGGCC--- |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTGATGGCTGGA TGATTRATGGCY--- |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGTGATGGCTGGA --TGATTTATGGC |
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PB0195.1_Zbtb3_2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -8 |
Orientation: | reverse strand |
Alignment: | --------AGTGATGGCTGGA NNNNTGCCAGTGATTG----- |
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