Information for 2-CCACCTAGTGGCC (Motif 3)

G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
Reverse Opposite:
A C T G T A C G A G T C A G T C C T G A G T A C G A C T C T G A A C T G C T A G A C G T A T C G C A T G
p-value:1e-20
log p-value:-4.805e+01
Information Content per bp:1.787
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif65.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets55.1 +/- 27.0bp
Average Position of motif in Background45.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------CCACCTAGTGGCC-
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----CCACCTAGTGGCC-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.78
Offset:-8
Orientation:forward strand
Alignment:--------CCACCTAGTGGCC
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCACCTAGTGGCC
ACCACCTGTT----
 A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCACCTAGTGGCC
NNCACCTGNN----
 A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCACCTAGTGGCC-
CCGCCCAAGGGCAG
 G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCACCTAGTGGCC-
CCCCCTTGGGCCCC
 G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C A C G T
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCACCTAGTGGCC
ANCCACCTGTTGCNC
 A C G T A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCACCTAGTGGCC
CCCCCCCGGGGGNN
 A C G T G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCACCTAGTGGCC
---CCGATTGGCT
 G A T C A T G C T G C A A G T C A G T C A G C T C T G A A C T G G A C T A C T G A C T G A T G C G T A C
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T