Information for 6-CATGCATGAG (Motif 17)

G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C C G T A A C G T A C T G A T G C C G T A C G A T A C T G
p-value:1e-7
log p-value:-1.772e+01
Information Content per bp:1.839
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif81.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets66.1 +/- 24.4bp
Average Position of motif in Background44.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CATGCATGAG---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCATGAG
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGCATGAG-
-ATGMATATDC
 G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATGCATGAG--
TTCACGCATGAGTT
 A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATGCATGAG-
-TTGCGTGCVA
 G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PAX1/MA0779.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATGCATGAG----
CGTCACGCATGACTGCA
 A C G T A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATGCATGAG---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CATGCATGAG
SCAGYCADGCATGAC
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATGCATGAG----
ACTATGAATGAATGAT
 A C G T A C G T G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CATGCATGAG
----CATGAC
 G T A C C G T A C G A T A T C G G T A C G T C A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C