Information for 4-CCGGGMTTCC (Motif 10)

A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C
Reverse Opposite:
T A C G C T A G T C G A C T G A A C G T A T G C A T G C T A G C C A T G T A C G
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.650
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif10.49%
Number of Background Sequences with motif2338.2
Percentage of Background Sequences with motif4.80%
Average Position of motif in Targets51.3 +/- 27.3bp
Average Position of motif in Background49.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGGGMTTCC---
-GGGGATTCCCCC
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T A C G T A C G T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCGGGMTTCC
-NGGGATTA-
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGGGMTTCC
----GCTTCC
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGGGMTTCC---
AGGGGATTCCCCT
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCGGGMTTCC---
---RCATTCCWGG
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGMTTCC
GCTCGGSCTC-
 A C G T A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCGGGMTTCC-
TTGCCCGGATTAGG
 A C G T A C G T A C G T A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCGGGMTTCC-
--GGGATTANN
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CCGGGMTTCC---
------TTCCTCT
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

NFKB2/MA0778.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGGGMTTCC---
AGGGGATTCCCCT
 A T G C G T A C A C T G A T C G A T C G T G C A G A C T A G C T A G T C A T G C A C G T A C G T A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T