Information for 19-TCTTGGTTGGCGTCTT (Motif 34)

A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
Reverse Opposite:
C G T A C G T A A T C G C G T A G T A C C T A G A G T C A G T C C G T A G T C A A G T C A G T C C G T A C G T A A T C G C G T A
p-value:1e-6
log p-value:-1.448e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 28.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT
NGTAGGTTGGCATNNN
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT
----GGTTGGCAT---
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTTGGTTGGCGTCTT
GTATTGGGTGGGTAATT
 A C G T A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TCTTGGTTGGCGTCTT
------TTGGCA----
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT
--TTGATTGN------
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT
-----NTTGGCANN--
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT-
-----TAAGGCGTCTTG
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCTTGGTTGGCGTCTT-
-----GATGACGTCATC
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---TCTTGGTTGGCGTCTT
NNNNGTTGATTGGGTCG--
 A C G T A C G T A C G T A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TCTTGGTTGGCGTCTT
-CGTGGGTGGTCC---
 A C G T A T G C A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C T G G A T C A C T G A C G T A T G C A C G T A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T