p-value: | 1e-6 |
log p-value: | -1.567e+01 |
Information Content per bp: | 1.676 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.26% |
Number of Background Sequences with motif | 54.4 |
Percentage of Background Sequences with motif | 0.11% |
Average Position of motif in Targets | 43.6 +/- 21.6bp |
Average Position of motif in Background | 44.1 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0112.1_Nkx2-3/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTATTAAGCACAT---- -CNTTAAGTACTTAANG |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTATTAAGCACAT---- NATTTAAGTACTTANNA |
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PH0116.1_Nkx2-9/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTATTAAGCACAT---- NATTTAAGTACTTNAAA |
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POU2F1/MA0785.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTATTAAGCACAT- --AATATGCAAATT |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTATTAAGCACAT ---TTATGCAAAT |
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SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GTATTAAGCACAT--- -----AAGGATATNTN |
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POU3F3/MA0788.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTATTAAGCACAT-- --ATTATGCTAATTT |
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Arid3b/MA0601.1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GTATTAAGCACAT ATATTAATTAA-- |
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POU1F1/MA0784.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GTATTAAGCACAT--- --AATATGCAAATTAG |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTATTAAGCACAT---- -TTGTATGCAAATTAGA |
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