Information for 8-GCTTTTCACG (Motif 31)

A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C G T A C G T A C G T A C G T A A C T G A G T C
p-value:1e-7
log p-value:-1.733e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 30.2bp
Average Position of motif in Background75.2 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG----
--TTTTCGCGCGAA
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTTTTCACG---
-VDTTTCCCGCCA
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG---
--NTTTTACGACT
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG---
--NTTTTACGACC
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG---
--NTTTTACGACC
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG--
--NTTTTACGAC
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG---
--NTTTTACGAGN
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCACG--
--NTTTTACGAC
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTTTTCACG---
-ANTTTTACGACC
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTTTTCACG---
---TBGCACGCAA
 A C T G A G T C C G A T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A