Information for 17-AATAAAAATAACAGGT (Motif 27)

C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
Reverse Opposite:
C G T A G T A C A G T C A C G T A C T G A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.944
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 28.3bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAATAACAGGT
AATGCAATAAAATTTAT----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAATAACAGGT
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATAAAAATAACAGGT
ATGCTAAAAATAGAA---
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATAAAAATAACAGGT
CCAATAAAAA--------
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAATAACAGGT
TAGGTAATAAAATTCA-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATAAAAATAACAGGT
CCAATAAAAA--------
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATAAAAATAACAGGT
DCYAAAAATAGM----
 C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AATAAAAATAACAGGT--
---AAAAATAACAAACGG
 C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAAATAACAGGT
AACCCAATAAAATTCG-----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATAAAAATAACAGGT
CCAATAAAAC--------
 A C G T A C G T C G T A C G T A A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C C G T A C T A G A C T G C G A T
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T