Information for 3-AGTGGGTGGCATGCAA (Motif 4)

C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T C T A G A G T C G C T A A G C T C A T G A G T C A G T C T C G A G T A C T A G C A T G C G T C A A G T C A G C T
p-value:1e-13
log p-value:-3.163e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 25.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGTGGCATGCAA
NGCGTGGGCGGR------
 A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGGTGGCATGCAA
NGTAGGTTGGCATNNN-
 A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGGGTGGCATGCAA
---GGTTGGCAT----
 C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGTGGGTGGCATGCAA
TGCGTGGGYG--------
 A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTGGGTGGCATGCAA
TTRAGTGSYK---------
 A C G T A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGTGGCATGCAA
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGGTGGCATGCAA
NTCAAGTGGN----------
 A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGGTGGCATGCAA
TTGAGTGSTT---------
 A C G T A C G T A C G T C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGGGTGGCATGCAA
TGGGTGGGGC------
 C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGGGTGGCATGCAA
DGGGYGKGGC------
 C T G A A C T G A C G T A T C G A T C G A C T G A C G T C T A G C T A G G A T C C T G A C G A T T A C G A G T C G T C A C T G A
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T