Information for 5-TACGCTGTAG (Motif 25)

A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C G A C T C G T A A G T C C G T A A C T G A G T C A C T G A C G T C G T A
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.4 +/- 26.1bp
Average Position of motif in Background56.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TACGCTGTAG-----
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TACGCTGTAG-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TACGCTGTAG-----
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TACGCTGTAG
---GCTGTG-
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TACGCTGTAG
--NGCTN---
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TACGCTGTAG---
---GCTGTGGTTT
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TACGCTGTAG---
--GTCTGTGGTTT
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TACGCTGTAG----
--NNHTGTGGTTWN
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TACGCTGTAG
-CAGCTGTT-
 A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G
A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TACGCTGTAG
ATCAGCTGTT-
 A C G T A C G T T C G A T A G C A C T G A G T C A C G T A C T G A C G T C G T A A C T G
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T