Information for 11-CCCAGGTCACTGRHDW (Motif 13)

A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
Reverse Opposite:
C G A T G T A C C T G A G A T C A T G C C G T A A C T G C G A T A C T G C T G A A G T C A G T C A G C T C T A G A T C G T A C G
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.670
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.8 +/- 31.0bp
Average Position of motif in Background48.8 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW---
---CAATCACTGGCAGAAT
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCAGGTCACTGRHDW
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCAGGTCACTGRHDW
--NAGGTCANTGACCT
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW
--AAGGTCAC------
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW-
-GTAGGTCACTGGGTCA
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW
----AGTCACGC----
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW
---RGGGCACTAACY-
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW
---AGGTCA-------
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCCAGGTCACTGRHDW
--CAAATCACTG----
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCCAGGTCACTGRHDW
TCAAGGTCAN------
 A T G C A T G C G A T C C T G A C T A G C T A G G A C T G T A C G C T A A G T C C G A T A T C G C T A G G A C T C A T G G C T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T