Information for 12-SMDGSCTGGCAGCASC (Motif 38)

A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
Reverse Opposite:
A C T G A T C G A C G T A C T G A T G C C G A T A C T G A T G C A G T C C G T A A C T G A T C G G T A C G A T C A C G T A T C G
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.737
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.4 +/- 29.2bp
Average Position of motif in Background43.2 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC
----SCTGTCARCACC
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC
----CTTGGCAA----
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:SMDGSCTGGCAGCASC
---VGCTGWCAVB---
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC
---TNNGGGCAG----
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC
----TGAGTCAGCA--
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC
----NTTGGCANN---
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC-
-------GGGAGGACNG
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SMDGSCTGGCAGCASC
TGGCAGNCTGCCAG----
 A C G T A C G T A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SMDGSCTGGCAGCASC--
-------GTCAGCANNTN
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:SMDGSCTGGCAGCASC
-----TTGGCA-----
 A T G C G T C A C T A G A C T G T A G C A G T C C G A T A C T G A T C G G T A C C G T A A T C G G T A C C G T A A T G C G T A C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T