Information for 2-CTCCCAAGGGACT (Motif 2)

A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
Reverse Opposite:
C G T A A C T G A C G T A G T C A G T C G A T C A C G T A C G T A C T G A C T G A T C G C G T A T C A G
p-value:1e-21
log p-value:-4.837e+01
Information Content per bp:1.779
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.0 +/- 29.5bp
Average Position of motif in Background40.4 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTCCCAAGGGACT
ATTCCCAAGGGAAT
 A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CTCCCAAGGGACT
-TCCCNNGGGACN
 A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCCCAAGGGACT
GTCCCCAGGGGA--
 A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCAAGGGACT
NTCCCCTCAGGGANT
 A C G T A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCCCAAGGGACT
NTCGCCTCAGGCAAT
 A C G T A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAAGGGACT
HTTTCCCASG-----
 A C G T A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCCAAGGGACT
ATTTCCCAGVAKSCY
 A C G T A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCCCAAGGGACT
TTGCCCTAGGGCAT
 A C G T A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCCCAAGGGACT
-GCCTCAGGGCAT
 A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTCCCAAGGGACT
-SCCTSAGGSCAW
 A G T C C G A T A T G C G T A C T A G C G T C A T C G A C A T G A C T G A C T G G T C A T A G C G A C T
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T