Information for 6-GTGGTTTACG (Motif 18)

T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
Reverse Opposite:
G T A C T C A G A G C T T G C A C G T A G C T A A T G C T G A C C T G A A G T C
p-value:1e-11
log p-value:-2.643e+01
Information Content per bp:1.669
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.68%
Number of Background Sequences with motif52.8
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets53.6 +/- 25.6bp
Average Position of motif in Background53.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTACG
NNTGTGGTTT---
 A C G T A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTACG
CTGTGGTTTN--
 A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTGGTTTACG
GCTGTGGTTT---
 A C G T A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GTGGTTTACG
GTCTGTGGTTT---
 A C G T A C G T A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTTACG
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGGTTTACG
-TTGTTTAC-
 T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTACG
TTTGCGGTTT---
 A C G T A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGTTTACG---
-DGWTTTATGRCN
 T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTTACG
TTGCGGTTT---
 A C G T A C G T T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGGTTTACG
-TTGTTTAC-
 T C A G A G C T A C T G T A C G C A G T C G A T A C G T T C G A A G T C C A T G
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T