Information for 4-AGGCCAGCWGGGCMGA (Motif 16)

T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
Reverse Opposite:
A C G T G T A C A C G T A T C G A G T C G T A C G T A C C G A T A C T G A G T C A C G T A C T G C T A G A T G C A T G C A C G T
p-value:1e-12
log p-value:-2.794e+01
Information Content per bp:1.735
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.1 +/- 29.5bp
Average Position of motif in Background71.8 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCCAGCWGGGCMGA
AGGTCACCCTGACCT-
 T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAGCWGGGCMGA
NAGGTCACNNTGACC--
 A C G T T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCCAGCWGGGCMGA
-DCHCAGCAGGRGGCC
 T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAGCWGGGCMGA
TRAGGTCA----------
 A C G T A C G T T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCCAGCWGGGCMGA
-DCTCAGCAGG-----
 T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCCAGCWGGGCMGA
--CACAGCAGGGGG--
 T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGCCAGCWGGGCMGA
GTAGGTCACTGGGTCA--
 A C G T A C G T T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGCCAGCWGGGCMGA
CCACACAGCAGGAGA--
 A C G T T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGCCAGCWGGGCMGA
CAAAGGTCAG---------
 A C G T A C G T A C G T T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCCAGCWGGGCMGA
-NAHCAGCTGD-----
 T C G A A T C G A T C G A G T C A G T C C G T A C T A G G T A C G C T A C A T G A C T G C T A G A T G C G T C A A C T G T G C A
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T