Information for 22-GMCWGCRATTRGG (Motif 23)

C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T C G T A C G T A C G A T A G T C A C T G A G T C C G T A A C T G A C T G A G T C
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 12.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GMCWGCRATTRGG
---ACCGATTAG-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GMCWGCRATTRGG
----GCAATTAG-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GMCWGCRATTRGG
----BCMATTAG-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GMCWGCRATTRGG
---NNCAATTANN
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Msx3/MA0709.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMCWGCRATTRGG
----CCAATTAA-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMCWGCRATTRGG
----CCAATTAG-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

BSX/MA0876.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMCWGCRATTRGG
----CCAATTAA-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GMCWGCRATTRGG
--CNGTGATTTN-
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

GBX2/MA0890.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GMCWGCRATTRGG
---ACCAATTAGC
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G
A C G T A C G T A C G T T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GMCWGCRATTRGG----
ACAAGCAATTAATGAAT
 C T A G G T A C A G T C C G A T A C T G A G T C C T A G C G T A A C G T A C G T C T G A A C T G A C T G A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T