Information for 1-TCTGATTGGC (Motif 2)

A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C
Reverse Opposite:
T C A G T G A C T A G C G C T A G T C A C A G T T A G C T G C A C T A G T G C A
p-value:1e-16
log p-value:-3.876e+01
Information Content per bp:1.653
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif11.78%
Number of Background Sequences with motif2277.7
Percentage of Background Sequences with motif4.83%
Average Position of motif in Targets49.2 +/- 25.7bp
Average Position of motif in Background49.2 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TCTGATTGGC------
-CTGATTGGTCNATTT
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:TCTGATTGGC-
-CCGATTGGCT
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.85
Offset:-5
Orientation:forward strand
Alignment:-----TCTGATTGGC---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:TCTGATTGGC----
--TGATTGGCTANN
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TCTGATTGGC
-TTGATTGN-
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCTGATTGGC---
-BTGABTGACAGS
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TCTGATTGGC-
-----TTGGCA
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCTGATTGGC
CNGTGATTTN-
 A C G T A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCTGATTGGC---
----NTTGGCANN
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCTGATTGGC---
-NTGATTGACAGN
 A C G T G A T C A C G T A T C G G T C A C A G T C G A T A T C G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G