Information for 13-GAGTCGATCC (Motif 18)

T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C
Reverse Opposite:
A C T G C A T G C G T A G A C T T G A C A T C G G T C A A T G C C G A T A G T C
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.702
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif194.3
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets47.7 +/- 24.3bp
Average Position of motif in Background52.6 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGTCGATCC
NTATYGATCH
 T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGTCGATCC
TAATCGATAA
 T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGTCGATCC
TAATCGATAA
 T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGTCGATCC
HNRAATCAAT--
 A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCGATCC-
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCGATCC-
NTTGATTNNATCAN
 A C G T A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGTCGATCC-
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

ONECUT1/MA0679.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAGTCGATCC-
AAAAAATCGATAAT
 A C G T A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GAGTCGATCC-
---ATAATCCC
 T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GAGTCGATCC-
AAAAAATCGATAAT
 A C G T A C G T A C G T T C A G C G T A T A C G C A G T A T G C A C T G C T G A C G A T G T A C T G A C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T