Information for 4-SKCYTCTCTAGSCGSC (Motif 14)

A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C A C T G A T C G A G T C A C G T C T G A A C T G C T G A A C T G C G T A C T A G A C T G G T A C A T C G
p-value:1e-9
log p-value:-2.183e+01
Information Content per bp:1.863
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.5 +/- 22.0bp
Average Position of motif in Background72.2 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SKCYTCTCTAGSCGSC
----TGTCTAGACG--
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:SKCYTCTCTAGSCGSC-----
----NNNNTTGGCGCCGANNN
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:SKCYTCTCTAGSCGSC-----
----NNNNTTGGCGCCGANNN
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SKCYTCTCTAGSCGSC
-NSCACTYVAV-----
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:SKCYTCTCTAGSCGSC
-TCTTATCT-------
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:SKCYTCTCTAGSCGSC
AGCCACTCAAG-----
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.50
Offset:1
Orientation:forward strand
Alignment:SKCYTCTCTAGSCGSC
-RSCACTYRAG-----
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:SKCYTCTCTAGSCGSC---
-------TTTGGCGCCAAA
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:SKCYTCTCTAGSCGSC
-AGGTCTCTAACC---
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:SKCYTCTCTAGSCGSC
-CCTTTTATAGNC---
 A T G C C A T G A G T C A G T C A C G T A G T C A G C T A G T C A G C T C G T A A C T G A T G C A G T C A T C G A T G C A G T C
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T