Information for 13-CMKTGMAGGCAWG (Motif 12)

A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C T G A G T C A G T C A C G T A C T G A G T C C G T A G T A C A C G T A T C G
p-value:1e-10
log p-value:-2.354e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.5 +/- 13.2bp
Average Position of motif in Background58.3 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:CMKTGMAGGCAWG---
-----AAGGCAAGTGT
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CMKTGMAGGCAWG
---TNNGGGCAG-
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CMKTGMAGGCAWG
TGCCCTGAGGGCA--
 A C G T A C G T A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CMKTGMAGGCAWG
---GGTTGGCAT-
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CMKTGMAGGCAWG-
----CCWGGAATGY
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CMKTGMAGGCAWG
NGCTTTCTAGGAAN-
 A C G T A C G T A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CMKTGMAGGCAWG-
------TGGAATGT
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CMKTGMAGGCAWG------
----SCAGYCADGCATGAC
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CMKTGMAGGCAWG-
------AGGCCTNG
 A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CMKTGMAGGCAWG-
CCATTGTATGCAAAT
 A C G T A T G C G T C A A C T G C G A T A C T G G T A C C G T A A C T G A C T G A G T C C T G A C G A T A C T G A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T